BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020G02SP1|AL427659
(334 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1776 573 e-164
>3x_Contig1776
Length = 26138
Score = 573 bits (285), Expect = e-164
Identities = 321/334 (96%), Gaps = 4/334 (1%)
Strand = Plus / Plus
Query: 1 aaagtgaaactcaattcgttgttgtatattgtcattacttagamatttttatctagaaca 60
||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| ||
Sbjct: 16235 aaagtgaaactcaattcgttgttgt-tattgtcattacttagacattttt-tctgc--ca 16290
Query: 61 ggagagatatgaagattgtatcgttctaattaatagatwtttctccacttcagagtcwmt 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 16291 ggagagatatgaagattgtatcgttctaattaatagatttttctccacttcagagtctct 16350
Query: 121 wgggtcaaagtcttgcgaaatacctccacgaaaattgtacaaagagatctggaaagtata 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16351 tgggtcaaagtcttgcgaaatacctccacgaaaattgtacaaagagatctggaaagtata 16410
Query: 181 ccgaggatactatagactaataavttgtaaactaagaggcagtgataactggatacacac 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 16411 ccgaggatactatagactaataaattgtaaactaagaggcagtgataactggatacacac 16470
Query: 241 tacggtacagaaacgaaaagacatcaaaagtagacttgattatdagatgttcgatgtttt 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 16471 tacggtacagaaacgaaaagacatcaaaagtagacttgattataagatgttcgatgtttt 16530
Query: 301 taataagatgactatcgagcacggaactcttttg 334
||||||||||||||||||||||||||||||||||
Sbjct: 16531 taataagatgactatcgagcacggaactcttttg 16564
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1839
Number of Sequences: 1807
Number of extensions: 1839
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 334
length of database: 10,358,551
effective HSP length: 15
effective length of query: 319
effective length of database: 10,331,446
effective search space: 3295731274
effective search space used: 3295731274
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 49 (99.0 bits)